Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 AC068472.1-201ENST00000474589 881 ntBASIC18.66■□□□□ 0.58
ATP2A3Q93084 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A3Q93084 HLA-A-201ENST00000376802 1334 ntBASIC18.66■□□□□ 0.58
ATP2A3Q93084 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A3Q93084 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2A3Q93084 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A3Q93084 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A3Q93084 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 AC005336.2-201ENST00000593183 939 ntBASIC18.65■□□□□ 0.58
ATP2A3Q93084 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATP2A3Q93084 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A3Q93084 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.58
ATP2A3Q93084 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2A3Q93084 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2A3Q93084 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.64■□□□□ 0.58
ATP2A3Q93084 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A3Q93084 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A3Q93084 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A3Q93084 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 AC009533.2-201ENST00000543664 586 ntBASIC18.63■□□□□ 0.57
ATP2A3Q93084 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP2A3Q93084 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms