Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL163051.1-201ENST00000569214 1512 ntBASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 AP000523.1-201ENST00000398242 1049 ntBASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 YBX1P2-201ENST00000489612 999 ntBASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40AQ8WXH6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40AQ8WXH6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40AQ8WXH6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40AQ8WXH6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40AQ8WXH6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40AQ8WXH6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40AQ8WXH6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 TSPY5P-201ENST00000426936 936 ntBASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 NTF6B-201ENST00000591913 560 ntBASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40AQ8WXH6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 MCCD1P1-208ENST00000445732 328 ntBASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 AC063952.2-201ENST00000498792 1227 ntBASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 AC022616.7-201ENST00000525383 220 ntBASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 WWOX-216ENST00000569818 525 ntBASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 AC008622.2-201ENST00000617006 1229 ntBASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40AQ8WXH6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms