Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 SLC25A1P1-201ENST00000528351 927 ntBASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 AL589182.2-201ENST00000619332 1049 ntBASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 LINC01451-201ENST00000623792 534 ntBASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD1Q8NHV4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 IGHV3-22-201ENST00000520721 359 ntBASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 AC105339.3-201ENST00000560043 636 ntBASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD1Q8NHV4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 KRT18P27-201ENST00000427733 1299 ntBASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 AF228730.7-201ENST00000641842 219 ntBASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 NOC2LP1-202ENST00000452600 2235 ntBASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.55■□□□□ 0.88
NEDD1Q8NHV4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AC012317.2-201ENST00000623305 2251 ntBASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 AP002414.3-201ENST00000589352 1468 ntBASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 LINC00304-203ENST00000565008 1864 ntBASIC20.54■□□□□ 0.88
NEDD1Q8NHV4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms