Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL22A1Q8NFW1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL22A1Q8NFW1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.38■■□□□ 1.33
COL22A1Q8NFW1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 TSSK5P-201ENST00000423978 907 ntBASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AC009118.2-201ENST00000613275 655 ntBASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL22A1Q8NFW1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 GNAS-203ENST00000306120 1878 ntBASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.36■■□□□ 1.33
COL22A1Q8NFW1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 ARSEP1-201ENST00000420443 635 ntBASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 CU639417.3-201ENST00000624240 1404 ntBASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.35■■□□□ 1.33
COL22A1Q8NFW1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 PIN1P1-201ENST00000412108 996 ntBASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 LINC01225-203ENST00000563550 1244 ntBASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL22A1Q8NFW1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 MYCLP1-201ENST00000372451 1075 ntBASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC23.33■■□□□ 1.33
COL22A1Q8NFW1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms