Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 KRT16P2-201ENST00000414673 1423 ntBASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPTSSBQ8NFR3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 SYT6-210ENST00000641643 1587 ntBASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 AC024909.3-201ENST00000611513 2257 ntBASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 AC139749.1-202ENST00000617529 3139 ntBASIC9.71□□□□□ -0.85
SPTSSBQ8NFR3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 ABHD17AP3-201ENST00000503096 1137 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 AC103724.3-201ENST00000564481 992 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 EEF1DP3-203ENST00000566025 782 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 AL033527.3-201ENST00000566366 1196 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 AL138724.1-201ENST00000606771 1088 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 REXO1L9P-201ENST00000604264 2108 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 AC005224.4-201ENST00000583262 1652 ntBASIC9.71□□□□□ -0.86
SPTSSBQ8NFR3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
SPTSSBQ8NFR3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms