Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 AL135905.2-201ENST00000584934 1404 ntBASIC17.23■□□□□ 0.35
HIPK4Q8NE63 TSPY26P-202ENST00000565928 3884 ntBASIC17.23■□□□□ 0.35
HIPK4Q8NE63 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 MIR4651-201ENST00000582622 73 ntBASIC17.23■□□□□ 0.35
HIPK4Q8NE63 DGCR10-201ENST00000609839 495 ntBASIC17.23■□□□□ 0.35
HIPK4Q8NE63 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 AL138688.1-201ENST00000624851 1594 ntBASIC17.23■□□□□ 0.35
HIPK4Q8NE63 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 AGGF1P2-201ENST00000426656 2106 ntBASIC17.23■□□□□ 0.35
HIPK4Q8NE63 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIPK4Q8NE63 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 AC034236.2-201ENST00000606662 1610 ntBASIC17.22■□□□□ 0.35
HIPK4Q8NE63 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 FLJ38576-201ENST00000623820 2459 ntBASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 FAM197Y1-201ENST00000421178 764 ntBASIC17.22■□□□□ 0.35
HIPK4Q8NE63 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.22■□□□□ 0.35
HIPK4Q8NE63 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 AL359736.2-201ENST00000621992 437 ntBASIC17.22■□□□□ 0.35
HIPK4Q8NE63 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 GPAT2P1-201ENST00000444924 1672 ntBASIC17.22■□□□□ 0.35
HIPK4Q8NE63 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HIPK4Q8NE63 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 DOC2GP-204ENST00000639052 2548 ntBASIC17.21■□□□□ 0.35
HIPK4Q8NE63 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HIPK4Q8NE63 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms