Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL139400.1-201ENST00000366220 510 ntBASIC18.08■□□□□ 0.48
SIX5Q8N196 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX5Q8N196 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SIX5Q8N196 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.08■□□□□ 0.48
SIX5Q8N196 PAWRP1-201ENST00000451083 565 ntBASIC18.08■□□□□ 0.48
SIX5Q8N196 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX5Q8N196 RPS15P9-201ENST00000494093 319 ntBASIC18.08■□□□□ 0.48
SIX5Q8N196 AP000344.2-201ENST00000512987 629 ntBASIC18.08■□□□□ 0.48
SIX5Q8N196 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX5Q8N196 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.08■□□□□ 0.48
SIX5Q8N196 PDPK2P-202ENST00000562415 1191 ntBASIC18.08■□□□□ 0.48
SIX5Q8N196 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.08■□□□□ 0.48
SIX5Q8N196 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.08■□□□□ 0.48
SIX5Q8N196 AC008667.4-201ENST00000607370 168 ntBASIC18.08■□□□□ 0.48
SIX5Q8N196 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.08■□□□□ 0.48
SIX5Q8N196 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX5Q8N196 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.08■□□□□ 0.48
SIX5Q8N196 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIX5Q8N196 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.08■□□□□ 0.48
SIX5Q8N196 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SIX5Q8N196 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SIX5Q8N196 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.08■□□□□ 0.48
SIX5Q8N196 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SIX5Q8N196 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 AL020989.1-201ENST00000422979 469 ntBASIC18.07■□□□□ 0.48
SIX5Q8N196 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX5Q8N196 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SIX5Q8N196 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX5Q8N196 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.07■□□□□ 0.48
SIX5Q8N196 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.07■□□□□ 0.48
SIX5Q8N196 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.07■□□□□ 0.48
SIX5Q8N196 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SIX5Q8N196 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SIX5Q8N196 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.07■□□□□ 0.48
SIX5Q8N196 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.07■□□□□ 0.48
SIX5Q8N196 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIX5Q8N196 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.06■□□□□ 0.48
SIX5Q8N196 AC096633.1-201ENST00000422446 749 ntBASIC18.06■□□□□ 0.48
SIX5Q8N196 FAM58CP-201ENST00000435741 640 ntBASIC18.06■□□□□ 0.48
SIX5Q8N196 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.06■□□□□ 0.48
SIX5Q8N196 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 AC004877.2-201ENST00000623941 599 ntBASIC18.06■□□□□ 0.48
SIX5Q8N196 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 AL161938.1-201ENST00000569833 2180 ntBASIC18.06■□□□□ 0.48
SIX5Q8N196 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SIX5Q8N196 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
SIX5Q8N196 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIX5Q8N196 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SIX5Q8N196 BCAR1-209ENST00000546196 1340 ntBASIC18.05■□□□□ 0.48
SIX5Q8N196 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.05■□□□□ 0.48
SIX5Q8N196 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms