Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMC5Q8IY18 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.87■■□□□ 1.09
SMC5Q8IY18 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 AC090616.6-201ENST00000582640 721 ntBASIC21.86■■□□□ 1.09
SMC5Q8IY18 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 AC124864.1-201ENST00000623408 392 ntBASIC21.86■■□□□ 1.09
SMC5Q8IY18 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.86■■□□□ 1.09
SMC5Q8IY18 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.86■■□□□ 1.09
SMC5Q8IY18 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMC5Q8IY18 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 KRT8P26-201ENST00000534154 1276 ntBASIC21.85■■□□□ 1.09
SMC5Q8IY18 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMC5Q8IY18 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.85■■□□□ 1.09
SMC5Q8IY18 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 AL049757.1-201ENST00000616842 1596 ntBASIC21.84■■□□□ 1.09
SMC5Q8IY18 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 AC122714.2-201ENST00000502787 707 ntBASIC21.84■■□□□ 1.09
SMC5Q8IY18 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC5Q8IY18 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMC5Q8IY18 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMC5Q8IY18 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.83■■□□□ 1.09
SMC5Q8IY18 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.83■■□□□ 1.09
SMC5Q8IY18 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.83■■□□□ 1.09
SMC5Q8IY18 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC5Q8IY18 AC091607.1-201ENST00000490318 1060 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms