Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 AFG3L1P-217ENST00000557444 2447 ntBASIC22.04■■□□□ 1.12
COL23A1Q86Y22 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 SLC25A39P2-201ENST00000537614 270 ntBASIC22.04■■□□□ 1.12
COL23A1Q86Y22 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.04■■□□□ 1.12
COL23A1Q86Y22 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 GRAP-202ENST00000395635 834 ntTSL 2 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 FAM86C2P-203ENST00000528684 1004 ntBASIC22.03■■□□□ 1.12
COL23A1Q86Y22 AC243562.1-201ENST00000560672 389 ntBASIC22.03■■□□□ 1.12
COL23A1Q86Y22 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL23A1Q86Y22 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 TREML5P-201ENST00000421694 576 ntBASIC22.02■■□□□ 1.12
COL23A1Q86Y22 AC107890.1-201ENST00000422478 521 ntBASIC22.02■■□□□ 1.12
COL23A1Q86Y22 KRT18P32-201ENST00000424695 1287 ntBASIC22.02■■□□□ 1.12
COL23A1Q86Y22 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
COL23A1Q86Y22 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
COL23A1Q86Y22 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.11
COL23A1Q86Y22 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 OR8S1-201ENST00000310194 1080 ntBASIC22.01■■□□□ 1.11
COL23A1Q86Y22 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 COX11-202ENST00000571584 1108 ntTSL 2 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL23A1Q86Y22 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
COL23A1Q86Y22 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC22■■□□□ 1.11
COL23A1Q86Y22 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22■■□□□ 1.11
COL23A1Q86Y22 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22■■□□□ 1.11
COL23A1Q86Y22 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22■■□□□ 1.11
COL23A1Q86Y22 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22■■□□□ 1.11
COL23A1Q86Y22 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL23A1Q86Y22 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms