Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC099336.1-202ENST00000602961 463 ntBASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD3Q7Z3D4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AC097374.2-201ENST00000618617 1306 ntBASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AC007967.3-201ENST00000434308 558 ntBASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AC096582.2-201ENST00000510860 516 ntBASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD3Q7Z3D4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 DUSP5P1-201ENST00000441325 1139 ntBASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 AC138894.3-201ENST00000603787 634 ntBASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD3Q7Z3D4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms