Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AC034236.2-201ENST00000606662 1610 ntBASIC11.75□□□□□ -0.53
SCXQ7RTU7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 PCDHA12-202ENST00000613593 2588 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AC141586.3-201ENST00000562166 1838 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 FP475955.4-201ENST00000623131 1990 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AP002383.4-201ENST00000442518 975 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 MIR3180-1-201ENST00000580374 94 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 MIR3180-3-201ENST00000584616 94 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 KRT18P1-202ENST00000452408 1331 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 AC006333.2-201ENST00000607957 2099 ntBASIC11.74□□□□□ -0.53
SCXQ7RTU7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCXQ7RTU7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SCXQ7RTU7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.73□□□□□ -0.53
SCXQ7RTU7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCXQ7RTU7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms