Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TUBA1AQ71U36 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 AC073508.3-201ENST00000619697 1419 ntBASIC16.37■□□□□ 0.21
TUBA1AQ71U36 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 AC141257.4-201ENST00000634557 245 ntBASIC16.37■□□□□ 0.21
TUBA1AQ71U36 AC136944.6-201ENST00000634818 245 ntBASIC16.37■□□□□ 0.21
TUBA1AQ71U36 AC092865.7-201ENST00000641832 219 ntBASIC16.37■□□□□ 0.21
TUBA1AQ71U36 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TUBA1AQ71U36 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PCDHB19P-201ENST00000570871 2371 ntBASIC16.36■□□□□ 0.21
TUBA1AQ71U36 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 OR6D1P-203ENST00000641209 4860 ntBASIC16.36■□□□□ 0.21
TUBA1AQ71U36 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 MIR3180-5-201ENST00000583743 153 ntBASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AL138966.2-201ENST00000621997 464 ntBASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AL023973.1-201ENST00000624619 620 ntBASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TUBA1AQ71U36 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms