Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 AC004461.1-201ENST00000412461 403 ntBASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 SLC25A6P2-201ENST00000497974 877 ntBASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC141Q6ZP82 FLJ13224-201ENST00000313737 1514 ntBASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 AC046185.3-201ENST00000623228 1824 ntBASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 REXO1L11P-201ENST00000620964 1927 ntBASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC141Q6ZP82 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 AL135999.2-201ENST00000622438 1686 ntBASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 NABP1-203ENST00000409510 843 ntTSL 5 BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 SPCS2P1-201ENST00000561636 679 ntBASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 IGHV3OR16-6-201ENST00000568775 360 ntBASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCDC141Q6ZP82 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 AP000974.1-201ENST00000623909 2387 ntBASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 STK4-201ENST00000372801 2038 ntTSL 2 BASIC26.14■■□□□ 1.77
CCDC141Q6ZP82 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 AC105339.1-204ENST00000636249 355 ntBASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.13■■□□□ 1.77
CCDC141Q6ZP82 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 AC023141.5-201ENST00000458585 616 ntBASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 LSM12-202ENST00000585388 942 ntTSL 3 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 AC099522.2-201ENST00000607001 744 ntBASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 MADD-208ENST00000405573 1823 ntTSL 5 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 AC093503.3-201ENST00000624917 2352 ntBASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC141Q6ZP82 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC26.11■■□□□ 1.77
CCDC141Q6ZP82 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC141Q6ZP82 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms