Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 IL9RP2-201ENST00000423948 1312 ntBASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 NEFHP1-201ENST00000412845 2629 ntBASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SWSAP1Q6NVH7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SWSAP1Q6NVH7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 AC139887.3-201ENST00000568585 713 ntBASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 AC116407.3-201ENST00000623905 1129 ntBASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 AL022326.1-202ENST00000641533 845 ntBASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 SIGLEC16-201ENST00000599858 1437 ntBASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.67■□□□□ 0.74
SWSAP1Q6NVH7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 AL020989.1-201ENST00000422979 469 ntBASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 PRYP5-201ENST00000451909 266 ntBASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.66■□□□□ 0.74
SWSAP1Q6NVH7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms