Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AC096633.1-201ENST00000422446 749 ntBASIC20.49■□□□□ 0.87
KRT40Q6A162 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT40Q6A162 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 KRT8P26-201ENST00000534154 1276 ntBASIC20.49■□□□□ 0.87
KRT40Q6A162 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.49■□□□□ 0.87
KRT40Q6A162 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AL732292.2-201ENST00000609649 430 ntBASIC20.49■□□□□ 0.87
KRT40Q6A162 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 AC124864.1-201ENST00000623408 392 ntBASIC20.49■□□□□ 0.87
KRT40Q6A162 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT40Q6A162 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT40Q6A162 HLA-J-201ENST00000462773 1622 ntBASIC20.49■□□□□ 0.87
KRT40Q6A162 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT40Q6A162 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT40Q6A162 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KRT40Q6A162 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KRT40Q6A162 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
KRT40Q6A162 AC079781.3-201ENST00000449110 356 ntBASIC20.48■□□□□ 0.87
KRT40Q6A162 AC104692.2-201ENST00000603054 253 ntBASIC20.48■□□□□ 0.87
KRT40Q6A162 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 LINC01451-201ENST00000623792 534 ntBASIC20.48■□□□□ 0.87
KRT40Q6A162 AL645608.8-201ENST00000606034 2086 ntBASIC20.48■□□□□ 0.87
KRT40Q6A162 AC141586.5-201ENST00000624546 2050 ntBASIC20.48■□□□□ 0.87
KRT40Q6A162 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 HTR7P1-202ENST00000624664 4411 ntBASIC20.48■□□□□ 0.87
KRT40Q6A162 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT40Q6A162 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT40Q6A162 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 AL353801.3-201ENST00000609898 542 ntBASIC20.47■□□□□ 0.87
KRT40Q6A162 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KRT40Q6A162 IGHV3-41-201ENST00000613121 348 ntBASIC20.47■□□□□ 0.87
KRT40Q6A162 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT40Q6A162 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT40Q6A162 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT40Q6A162 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT40Q6A162 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT40Q6A162 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT40Q6A162 BX276092.7-203ENST00000637198 1536 ntBASIC20.47■□□□□ 0.87
KRT40Q6A162 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms