Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 TSPY22P-201ENST00000427496 604 ntBASIC18.36■□□□□ 0.53
LRRC38Q5VT99 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC38Q5VT99 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 AC116353.5-201ENST00000638148 1699 ntBASIC18.35■□□□□ 0.53
LRRC38Q5VT99 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 AC125634.1-201ENST00000438758 1403 ntBASIC18.35■□□□□ 0.53
LRRC38Q5VT99 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 MYCLP1-201ENST00000372451 1075 ntBASIC18.35■□□□□ 0.53
LRRC38Q5VT99 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 AC090616.6-201ENST00000582640 721 ntBASIC18.35■□□□□ 0.53
LRRC38Q5VT99 AC011498.5-201ENST00000592027 486 ntBASIC18.35■□□□□ 0.53
LRRC38Q5VT99 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRRC38Q5VT99 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 AC007967.3-201ENST00000434308 558 ntBASIC18.34■□□□□ 0.53
LRRC38Q5VT99 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC38Q5VT99 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC38Q5VT99 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 AC122714.2-201ENST00000502787 707 ntBASIC18.33■□□□□ 0.52
LRRC38Q5VT99 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms