Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 AC092338.2-201ENST00000568827 1415 ntBASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 AC060834.1-201ENST00000443027 2032 ntBASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 CCR12P-201ENST00000446203 998 ntBASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00242Q5T6M2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 ABHD17AP1-201ENST00000358206 933 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms