Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 LINC02199-201ENST00000506655 2702 ntBASIC15.87■□□□□ 0.13
CCDC58Q4VC31 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 AC128676.1-201ENST00000454392 318 ntBASIC15.87■□□□□ 0.13
CCDC58Q4VC31 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC58Q4VC31 DOC2GP-204ENST00000639052 2548 ntBASIC15.87■□□□□ 0.13
CCDC58Q4VC31 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 NUDT16P1-203ENST00000513809 620 ntBASIC15.86■□□□□ 0.13
CCDC58Q4VC31 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 AC008687.5-201ENST00000593746 558 ntBASIC15.86■□□□□ 0.13
CCDC58Q4VC31 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC58Q4VC31 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.85■□□□□ 0.13
CCDC58Q4VC31 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 HLA-J-201ENST00000462773 1622 ntBASIC15.85■□□□□ 0.13
CCDC58Q4VC31 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC58Q4VC31 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms