Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 RFPL4AP1-201ENST00000530883 850 ntBASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 AC116407.2-201ENST00000613639 860 ntBASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AC135776.1-201ENST00000319817 2481 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 CNN2P11-201ENST00000429351 262 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AC002558.1-201ENST00000488906 803 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 IGHV3-52-201ENST00000519770 353 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 KRT19P2-202ENST00000557173 1012 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AL031432.2-201ENST00000566714 459 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AL928711.1-201ENST00000570165 459 ntBASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM71Q2Q1W2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 CYMP-203ENST00000474680 1263 ntBASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM71Q2Q1W2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 WIZP1-201ENST00000531444 2299 ntBASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 CEND1P1-201ENST00000451006 455 ntBASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM71Q2Q1W2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms