Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 PIN1P1-201ENST00000412108 996 ntBASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 AC140878.1-201ENST00000565277 250 ntBASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 AP001059.3-201ENST00000619053 235 ntBASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 AC010460.3-201ENST00000511359 1579 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 KRT18P32-201ENST00000424695 1287 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 AL592309.1-201ENST00000443127 649 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 SPDYE11-202ENST00000450699 704 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 CXCL1P1-201ENST00000502804 216 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 SPDYE9P-201ENST00000570642 692 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 SPDYE10P-202ENST00000612005 668 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 SPDYE8P-202ENST00000612377 668 ntBASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO4Q2I0M5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 AC148477.5-201ENST00000625164 1645 ntBASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 U91328.1-201ENST00000437528 223 ntBASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 SERBP1P5-201ENST00000510079 1181 ntBASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 KRT8P48-201ENST00000515599 1220 ntBASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 AL353593.2-201ENST00000602529 1483 ntBASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.03■□□□□ 0.32
RSPO4Q2I0M5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms