Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.42■□□□□ 0.7
UBXN1Q04323 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.42■□□□□ 0.7
UBXN1Q04323 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.42■□□□□ 0.7
UBXN1Q04323 AL391807.1-203ENST00000604392 2365 ntBASIC19.42■□□□□ 0.7
UBXN1Q04323 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.42■□□□□ 0.7
UBXN1Q04323 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBXN1Q04323 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UBXN1Q04323 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBXN1Q04323 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 AC011676.5-201ENST00000624864 2660 ntBASIC19.41■□□□□ 0.7
UBXN1Q04323 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.41■□□□□ 0.7
UBXN1Q04323 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.41■□□□□ 0.7
UBXN1Q04323 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBXN1Q04323 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.41■□□□□ 0.7
UBXN1Q04323 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.4■□□□□ 0.7
UBXN1Q04323 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.4■□□□□ 0.7
UBXN1Q04323 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.4■□□□□ 0.7
UBXN1Q04323 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.4■□□□□ 0.7
UBXN1Q04323 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.4■□□□□ 0.7
UBXN1Q04323 AL136038.4-201ENST00000603606 1261 ntBASIC19.4■□□□□ 0.7
UBXN1Q04323 AC140113.3-201ENST00000605663 199 ntBASIC19.4■□□□□ 0.7
UBXN1Q04323 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBXN1Q04323 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBXN1Q04323 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.39■□□□□ 0.7
UBXN1Q04323 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.39■□□□□ 0.7
UBXN1Q04323 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.39■□□□□ 0.7
UBXN1Q04323 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
UBXN1Q04323 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
UBXN1Q04323 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBXN1Q04323 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.39■□□□□ 0.69
UBXN1Q04323 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.39■□□□□ 0.69
UBXN1Q04323 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.39■□□□□ 0.69
UBXN1Q04323 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
UBXN1Q04323 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.39■□□□□ 0.69
UBXN1Q04323 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
UBXN1Q04323 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 AC004263.2-201ENST00000617183 678 ntBASIC19.39■□□□□ 0.69
UBXN1Q04323 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBXN1Q04323 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.39■□□□□ 0.69
UBXN1Q04323 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UBXN1Q04323 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
UBXN1Q04323 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 AL121761.2-201ENST00000598007 1648 ntBASIC19.39■□□□□ 0.69
UBXN1Q04323 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBXN1Q04323 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms