Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RHBDL3P58872 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RHBDL3P58872 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RHBDL3P58872 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHBDL3P58872 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
RHBDL3P58872 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHBDL3P58872 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RHBDL3P58872 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.83■□□□□ 0.92
RHBDL3P58872 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 MYCLP1-201ENST00000372451 1075 ntBASIC20.82■□□□□ 0.92
RHBDL3P58872 PTCHD3P3-201ENST00000403073 906 ntBASIC20.82■□□□□ 0.92
RHBDL3P58872 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.82■□□□□ 0.92
RHBDL3P58872 VN2R19P-201ENST00000442399 1052 ntBASIC20.82■□□□□ 0.92
RHBDL3P58872 HCG4B-203ENST00000450128 991 ntBASIC20.82■□□□□ 0.92
RHBDL3P58872 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.82■□□□□ 0.92
RHBDL3P58872 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RHBDL3P58872 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RHBDL3P58872 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RHBDL3P58872 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.82■□□□□ 0.92
RHBDL3P58872 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.81■□□□□ 0.92
RHBDL3P58872 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.81■□□□□ 0.92
RHBDL3P58872 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.81■□□□□ 0.92
RHBDL3P58872 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.81■□□□□ 0.92
RHBDL3P58872 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RHBDL3P58872 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RHBDL3P58872 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDL3P58872 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.81■□□□□ 0.92
RHBDL3P58872 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
RHBDL3P58872 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RHBDL3P58872 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.8■□□□□ 0.92
RHBDL3P58872 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RHBDL3P58872 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.8■□□□□ 0.92
RHBDL3P58872 PRSS29P-201ENST00000440800 595 ntBASIC20.8■□□□□ 0.92
RHBDL3P58872 AC092183.1-201ENST00000469884 875 ntBASIC20.8■□□□□ 0.92
RHBDL3P58872 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.8■□□□□ 0.92
RHBDL3P58872 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.8■□□□□ 0.92
RHBDL3P58872 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.8■□□□□ 0.92
RHBDL3P58872 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RHBDL3P58872 AC002347.1-201ENST00000569543 541 ntBASIC20.8■□□□□ 0.92
RHBDL3P58872 OR7E47P-204ENST00000575924 449 ntBASIC20.8■□□□□ 0.92
RHBDL3P58872 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RHBDL3P58872 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDL3P58872 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RHBDL3P58872 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.8■□□□□ 0.92
RHBDL3P58872 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDL3P58872 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.79■□□□□ 0.92
RHBDL3P58872 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms