Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 LINC00602-201ENST00000629776 2065 ntBASIC16.25■□□□□ 0.19
CDH11P55287 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH11P55287 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH11P55287 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH11P55287 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 AC022211.2-201ENST00000585075 2527 ntBASIC16.24■□□□□ 0.19
CDH11P55287 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH11P55287 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CDH11P55287 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH11P55287 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH11P55287 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 AL121956.5-201ENST00000625261 221 ntBASIC16.24■□□□□ 0.19
CDH11P55287 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH11P55287 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH11P55287 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
CDH11P55287 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH11P55287 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH11P55287 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH11P55287 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH11P55287 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH11P55287 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH11P55287 AL138688.1-201ENST00000624851 1594 ntBASIC16.23■□□□□ 0.19
CDH11P55287 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH11P55287 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.23■□□□□ 0.19
CDH11P55287 KRT18P38-201ENST00000449496 1282 ntBASIC16.23■□□□□ 0.19
CDH11P55287 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH11P55287 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH11P55287 GCSHP2-201ENST00000560971 527 ntBASIC16.23■□□□□ 0.19
CDH11P55287 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.23■□□□□ 0.19
CDH11P55287 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDH11P55287 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH11P55287 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH11P55287 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH11P55287 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH11P55287 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 AC124067.4-201ENST00000519691 2379 ntBASIC16.22■□□□□ 0.19
CDH11P55287 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH11P55287 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 AC133963.1-201ENST00000504166 1679 ntBASIC16.22■□□□□ 0.19
CDH11P55287 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH11P55287 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms