Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 BX276092.7-203ENST00000637198 1536 ntBASIC18.43■□□□□ 0.54
CDH6P55285 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH6P55285 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH6P55285 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CDH6P55285 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH6P55285 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.42■□□□□ 0.54
CDH6P55285 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH6P55285 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH6P55285 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH6P55285 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH6P55285 AL645608.8-201ENST00000606034 2086 ntBASIC18.42■□□□□ 0.54
CDH6P55285 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH6P55285 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH6P55285 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.41■□□□□ 0.54
CDH6P55285 FAM86EP-206ENST00000510506 987 ntBASIC18.41■□□□□ 0.54
CDH6P55285 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CDH6P55285 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 AC010331.1-201ENST00000611423 582 ntBASIC18.41■□□□□ 0.54
CDH6P55285 AL592071.1-201ENST00000611956 408 ntBASIC18.41■□□□□ 0.54
CDH6P55285 AC124864.1-201ENST00000623408 392 ntBASIC18.41■□□□□ 0.54
CDH6P55285 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 AL138688.1-201ENST00000624851 1594 ntBASIC18.41■□□□□ 0.54
CDH6P55285 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH6P55285 AC005332.1-201ENST00000577698 1310 ntBASIC18.41■□□□□ 0.54
CDH6P55285 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH6P55285 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH6P55285 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH6P55285 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH6P55285 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH6P55285 AC106820.2-201ENST00000563775 3264 ntBASIC18.4■□□□□ 0.54
CDH6P55285 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CDH6P55285 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH6P55285 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH6P55285 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH6P55285 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH6P55285 MIR1224-201ENST00000408193 85 ntBASIC18.4■□□□□ 0.54
CDH6P55285 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH6P55285 RN7SL606P-201ENST00000472779 293 ntBASIC18.4■□□□□ 0.54
CDH6P55285 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms