Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH4P55283 LINC01451-201ENST00000623792 534 ntBASIC18.08■□□□□ 0.48
CDH4P55283 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH4P55283 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH4P55283 AC012317.2-201ENST00000623305 2251 ntBASIC18.08■□□□□ 0.48
CDH4P55283 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CDH4P55283 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH4P55283 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH4P55283 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDH4P55283 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH4P55283 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH4P55283 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH4P55283 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH4P55283 REXO1L11P-201ENST00000620964 1927 ntBASIC18.08■□□□□ 0.48
CDH4P55283 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH4P55283 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CDH4P55283 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDH4P55283 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH4P55283 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH4P55283 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 AL160237.2-201ENST00000556165 472 ntBASIC18.07■□□□□ 0.48
CDH4P55283 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH4P55283 AC073592.5-201ENST00000624854 528 ntBASIC18.07■□□□□ 0.48
CDH4P55283 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH4P55283 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH4P55283 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH4P55283 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH4P55283 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH4P55283 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH4P55283 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 MYCLP1-201ENST00000372451 1075 ntBASIC18.06■□□□□ 0.48
CDH4P55283 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 SCARNA2-201ENST00000458748 420 ntBASIC18.06■□□□□ 0.48
CDH4P55283 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH4P55283 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH4P55283 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CDH4P55283 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDH4P55283 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH4P55283 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH4P55283 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDH4P55283 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.05■□□□□ 0.48
CDH4P55283 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH4P55283 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH4P55283 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.05■□□□□ 0.48
CDH4P55283 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH4P55283 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CDH4P55283 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.05■□□□□ 0.48
CDH4P55283 AL139288.1-201ENST00000623748 933 ntBASIC18.05■□□□□ 0.48
CDH4P55283 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH4P55283 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH4P55283 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH4P55283 AL356309.3-201ENST00000624132 1934 ntBASIC18.05■□□□□ 0.48
CDH4P55283 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH4P55283 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms