Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCS2P54868 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGCS2P54868 CNN2P11-201ENST00000429351 262 ntBASIC20.33■□□□□ 0.85
HMGCS2P54868 DDX43P3-201ENST00000441064 443 ntBASIC20.33■□□□□ 0.85
HMGCS2P54868 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGCS2P54868 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.33■□□□□ 0.85
HMGCS2P54868 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.33■□□□□ 0.85
HMGCS2P54868 AC004877.2-201ENST00000623941 599 ntBASIC20.33■□□□□ 0.85
HMGCS2P54868 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.33■□□□□ 0.85
HMGCS2P54868 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
HMGCS2P54868 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
HMGCS2P54868 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HMGCS2P54868 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
HMGCS2P54868 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCS2P54868 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCS2P54868 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCS2P54868 ELL2P1-201ENST00000413990 1906 ntBASIC20.33■□□□□ 0.84
HMGCS2P54868 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.33■□□□□ 0.84
HMGCS2P54868 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGCS2P54868 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGCS2P54868 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 LINC00982-205ENST00000420957 435 ntBASIC20.32■□□□□ 0.84
HMGCS2P54868 MKNK2P1-201ENST00000437526 628 ntBASIC20.32■□□□□ 0.84
HMGCS2P54868 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 CEND1P1-201ENST00000451006 455 ntBASIC20.32■□□□□ 0.84
HMGCS2P54868 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 OR7E47P-204ENST00000575924 449 ntBASIC20.32■□□□□ 0.84
HMGCS2P54868 AL353135.1-201ENST00000606729 504 ntBASIC20.32■□□□□ 0.84
HMGCS2P54868 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.32■□□□□ 0.84
HMGCS2P54868 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGCS2P54868 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
HMGCS2P54868 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCS2P54868 REXO1L9P-201ENST00000604264 2108 ntBASIC20.32■□□□□ 0.84
HMGCS2P54868 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCS2P54868 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGCS2P54868 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGCS2P54868 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 BCAR1-209ENST00000546196 1340 ntBASIC20.31■□□□□ 0.84
HMGCS2P54868 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGCS2P54868 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HMGCS2P54868 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
HMGCS2P54868 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 AP002414.1-201ENST00000391405 1147 ntBASIC20.31■□□□□ 0.84
HMGCS2P54868 PDPK2P-202ENST00000562415 1191 ntBASIC20.31■□□□□ 0.84
HMGCS2P54868 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMGCS2P54868 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGCS2P54868 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
HMGCS2P54868 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HMGCS2P54868 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
HMGCS2P54868 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGCS2P54868 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HMGCS2P54868 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HMGCS2P54868 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HMGCS2P54868 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 AL020996.1-203ENST00000536896 2307 ntBASIC20.3■□□□□ 0.84
HMGCS2P54868 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGCS2P54868 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.3■□□□□ 0.84
HMGCS2P54868 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.3■□□□□ 0.84
HMGCS2P54868 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HMGCS2P54868 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.3■□□□□ 0.84
HMGCS2P54868 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.3■□□□□ 0.84
HMGCS2P54868 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS2P54868 RFPL4AP1-201ENST00000530883 850 ntBASIC20.3■□□□□ 0.84
HMGCS2P54868 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGCS2P54868 KRT19P2-202ENST00000557173 1012 ntBASIC20.3■□□□□ 0.84
HMGCS2P54868 AC096734.2-201ENST00000562054 433 ntBASIC20.3■□□□□ 0.84
HMGCS2P54868 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGCS2P54868 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms