Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SSR1P43307 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR1P43307 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SSR1P43307 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 AC011558.1-201ENST00000623459 338 ntBASIC18.86■□□□□ 0.61
SSR1P43307 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR1P43307 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.86■□□□□ 0.61
SSR1P43307 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SSR1P43307 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSR1P43307 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SSR1P43307 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 LINC00167-201ENST00000530583 1419 ntBASIC18.85■□□□□ 0.61
SSR1P43307 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SSR1P43307 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 TERF1P1-201ENST00000311003 1181 ntBASIC18.85■□□□□ 0.61
SSR1P43307 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.85■□□□□ 0.61
SSR1P43307 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 KRT18P57-201ENST00000443599 1254 ntBASIC18.85■□□□□ 0.61
SSR1P43307 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 DUTP2-201ENST00000519164 463 ntBASIC18.85■□□□□ 0.61
SSR1P43307 AL136038.4-201ENST00000603606 1261 ntBASIC18.85■□□□□ 0.61
SSR1P43307 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SSR1P43307 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SSR1P43307 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SSR1P43307 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SSR1P43307 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSR1P43307 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SSR1P43307 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SSR1P43307 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 AL391807.1-203ENST00000604392 2365 ntBASIC18.84■□□□□ 0.61
SSR1P43307 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.84■□□□□ 0.61
SSR1P43307 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SSR1P43307 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SSR1P43307 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.84■□□□□ 0.61
SSR1P43307 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 AC005521.1-201ENST00000393351 872 ntBASIC18.84■□□□□ 0.61
SSR1P43307 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.84■□□□□ 0.61
SSR1P43307 BX664615.1-201ENST00000443558 458 ntBASIC18.84■□□□□ 0.61
SSR1P43307 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.84■□□□□ 0.61
SSR1P43307 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.84■□□□□ 0.61
SSR1P43307 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.84■□□□□ 0.61
SSR1P43307 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.84■□□□□ 0.61
SSR1P43307 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.84■□□□□ 0.61
SSR1P43307 AC079602.3-201ENST00000623931 403 ntBASIC18.84■□□□□ 0.61
SSR1P43307 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SSR1P43307 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SSR1P43307 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSR1P43307 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSR1P43307 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.83■□□□□ 0.61
SSR1P43307 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSR1P43307 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SSR1P43307 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SSR1P43307 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSR1P43307 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSR1P43307 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSR1P43307 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSR1P43307 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms