Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.41■□□□□ 0.22
LCN1P31025 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.41■□□□□ 0.22
LCN1P31025 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCN1P31025 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.4■□□□□ 0.22
LCN1P31025 AC016734.2-201ENST00000624325 1377 ntBASIC16.4■□□□□ 0.22
LCN1P31025 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.4■□□□□ 0.22
LCN1P31025 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.4■□□□□ 0.22
LCN1P31025 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.4■□□□□ 0.22
LCN1P31025 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.4■□□□□ 0.22
LCN1P31025 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 AC010331.1-201ENST00000611423 582 ntBASIC16.4■□□□□ 0.22
LCN1P31025 LINC01451-201ENST00000623792 534 ntBASIC16.4■□□□□ 0.22
LCN1P31025 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LCN1P31025 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.4■□□□□ 0.22
LCN1P31025 AC100803.2-201ENST00000562459 1963 ntBASIC16.4■□□□□ 0.22
LCN1P31025 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LCN1P31025 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCN1P31025 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
LCN1P31025 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.39■□□□□ 0.22
LCN1P31025 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LCN1P31025 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
LCN1P31025 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.39■□□□□ 0.21
LCN1P31025 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LCN1P31025 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
LCN1P31025 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LCN1P31025 ARMC10P1-201ENST00000313754 855 ntBASIC16.39■□□□□ 0.21
LCN1P31025 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.39■□□□□ 0.21
LCN1P31025 TSSC2-201ENST00000450217 709 ntBASIC16.39■□□□□ 0.21
LCN1P31025 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.39■□□□□ 0.21
LCN1P31025 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.39■□□□□ 0.21
LCN1P31025 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LCN1P31025 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LCN1P31025 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCN1P31025 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LCN1P31025 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.38■□□□□ 0.21
LCN1P31025 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.38■□□□□ 0.21
LCN1P31025 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.38■□□□□ 0.21
LCN1P31025 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LCN1P31025 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms