Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN6P29350 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PTPN6P29350 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 FAM86EP-206ENST00000510506 987 ntBASIC16.81■□□□□ 0.28
PTPN6P29350 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPN6P29350 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.81■□□□□ 0.28
PTPN6P29350 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN6P29350 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 ZNF444P1-201ENST00000559497 298 ntBASIC16.81■□□□□ 0.28
PTPN6P29350 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 AC079602.3-201ENST00000623931 403 ntBASIC16.81■□□□□ 0.28
PTPN6P29350 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN6P29350 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN6P29350 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN6P29350 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 NKILA-202ENST00000614771 2598 ntBASIC16.8■□□□□ 0.28
PTPN6P29350 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN6P29350 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN6P29350 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN6P29350 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN6P29350 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 AL136038.3-201ENST00000561909 1096 ntBASIC16.8■□□□□ 0.28
PTPN6P29350 AC116407.2-201ENST00000613639 860 ntBASIC16.8■□□□□ 0.28
PTPN6P29350 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN6P29350 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 AL121761.2-201ENST00000598007 1648 ntBASIC16.8■□□□□ 0.28
PTPN6P29350 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PTPN6P29350 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN6P29350 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN6P29350 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PTPN6P29350 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN6P29350 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.79■□□□□ 0.28
PTPN6P29350 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 AC011676.5-201ENST00000624864 2660 ntBASIC16.79■□□□□ 0.28
PTPN6P29350 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 AC084018.2-201ENST00000613093 2607 ntBASIC16.79■□□□□ 0.28
PTPN6P29350 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 SPDYE13P-201ENST00000445314 798 ntBASIC16.79■□□□□ 0.28
PTPN6P29350 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.79■□□□□ 0.28
PTPN6P29350 AC024563.2-201ENST00000603282 481 ntBASIC16.79■□□□□ 0.28
PTPN6P29350 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTPN6P29350 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN6P29350 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTPN6P29350 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN6P29350 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTPN6P29350 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PTPN6P29350 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms