Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 AC125634.1-201ENST00000438758 1403 ntBASIC17.89■□□□□ 0.45
HLA-DPA1P20036 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 AC005332.8-201ENST00000622750 2735 ntBASIC17.88■□□□□ 0.45
HLA-DPA1P20036 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 HLA-J-201ENST00000462773 1622 ntBASIC17.88■□□□□ 0.45
HLA-DPA1P20036 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 AL138831.2-201ENST00000606564 490 ntBASIC17.88■□□□□ 0.45
HLA-DPA1P20036 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 REXO1L11P-201ENST00000620964 1927 ntBASIC17.88■□□□□ 0.45
HLA-DPA1P20036 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPA1P20036 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 AP002383.4-201ENST00000442518 975 ntBASIC17.87■□□□□ 0.45
HLA-DPA1P20036 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 AC005336.2-201ENST00000593183 939 ntBASIC17.87■□□□□ 0.45
HLA-DPA1P20036 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.87■□□□□ 0.45
HLA-DPA1P20036 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPA1P20036 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 COX5BP2-201ENST00000392354 334 ntBASIC17.86■□□□□ 0.45
HLA-DPA1P20036 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 AC005104.2-201ENST00000427818 678 ntBASIC17.86■□□□□ 0.45
HLA-DPA1P20036 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 TPSP2-201ENST00000561760 610 ntBASIC17.86■□□□□ 0.45
HLA-DPA1P20036 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 AP002414.4-201ENST00000589764 1148 ntBASIC17.86■□□□□ 0.45
HLA-DPA1P20036 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms