Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THRAP10827 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.79■□□□□ 0.44
THRAP10827 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.79■□□□□ 0.44
THRAP10827 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.79■□□□□ 0.44
THRAP10827 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.79■□□□□ 0.44
THRAP10827 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.79■□□□□ 0.44
THRAP10827 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
THRAP10827 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.79■□□□□ 0.44
THRAP10827 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.79■□□□□ 0.44
THRAP10827 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
THRAP10827 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.79■□□□□ 0.44
THRAP10827 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
THRAP10827 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THRAP10827 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THRAP10827 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THRAP10827 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
THRAP10827 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THRAP10827 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.79■□□□□ 0.44
THRAP10827 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
THRAP10827 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.79■□□□□ 0.44
THRAP10827 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.79■□□□□ 0.44
THRAP10827 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 AC080080.1-201ENST00000625121 2420 ntBASIC17.78■□□□□ 0.44
THRAP10827 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.78■□□□□ 0.44
THRAP10827 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 AC026396.1-201ENST00000419388 421 ntBASIC17.78■□□□□ 0.44
THRAP10827 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.78■□□□□ 0.44
THRAP10827 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.78■□□□□ 0.44
THRAP10827 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.78■□□□□ 0.44
THRAP10827 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
THRAP10827 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
THRAP10827 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 KRT18P1-202ENST00000452408 1331 ntBASIC17.77■□□□□ 0.44
THRAP10827 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.77■□□□□ 0.44
THRAP10827 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.77■□□□□ 0.44
THRAP10827 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.77■□□□□ 0.44
THRAP10827 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
THRAP10827 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.77■□□□□ 0.44
THRAP10827 KRT18P41-201ENST00000518924 1277 ntBASIC17.77■□□□□ 0.44
THRAP10827 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.77■□□□□ 0.44
THRAP10827 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.77■□□□□ 0.44
THRAP10827 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
THRAP10827 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THRAP10827 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
THRAP10827 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
THRAP10827 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
THRAP10827 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.77■□□□□ 0.43
THRAP10827 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
THRAP10827 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
THRAP10827 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.76■□□□□ 0.43
THRAP10827 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
THRAP10827 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.76■□□□□ 0.43
THRAP10827 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.76■□□□□ 0.43
THRAP10827 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.76■□□□□ 0.43
THRAP10827 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.76■□□□□ 0.43
THRAP10827 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
THRAP10827 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms