Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 FAM87A-204ENST00000613235 858 ntBASIC15.94■□□□□ 0.14
HLA-DPB1P04440 AC010653.2-201ENST00000623505 997 ntBASIC15.94■□□□□ 0.14
HLA-DPB1P04440 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DPB1P04440 KRT18P22-201ENST00000402024 1347 ntBASIC15.94■□□□□ 0.14
HLA-DPB1P04440 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.93■□□□□ 0.14
HLA-DPB1P04440 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 MIR3180-5-201ENST00000583743 153 ntBASIC15.93■□□□□ 0.14
HLA-DPB1P04440 AC145285.6-201ENST00000604632 637 ntBASIC15.93■□□□□ 0.14
HLA-DPB1P04440 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DPB1P04440 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 AC211429.1-201ENST00000415277 523 ntBASIC15.92■□□□□ 0.14
HLA-DPB1P04440 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 DUTP2-201ENST00000519164 463 ntBASIC15.92■□□□□ 0.14
HLA-DPB1P04440 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 CR769767.2-201ENST00000622735 460 ntBASIC15.92■□□□□ 0.14
HLA-DPB1P04440 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.92■□□□□ 0.14
HLA-DPB1P04440 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPB1P04440 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms