Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.06■□□□□ 0.48
MT-ND3P03897 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-ND3P03897 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-ND3P03897 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-ND3P03897 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-ND3P03897 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.06■□□□□ 0.48
MT-ND3P03897 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.06■□□□□ 0.48
MT-ND3P03897 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
MT-ND3P03897 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MT-ND3P03897 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MT-ND3P03897 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.06■□□□□ 0.48
MT-ND3P03897 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MT-ND3P03897 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MT-ND3P03897 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND3P03897 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 CROCCP2-202ENST00000412962 2773 ntBASIC18.05■□□□□ 0.48
MT-ND3P03897 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 AL031133.1-201ENST00000406807 723 ntBASIC18.05■□□□□ 0.48
MT-ND3P03897 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 NEK4P2-201ENST00000580004 1012 ntBASIC18.05■□□□□ 0.48
MT-ND3P03897 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MT-ND3P03897 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MT-ND3P03897 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MT-ND3P03897 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
MT-ND3P03897 NKILA-202ENST00000614771 2598 ntBASIC18.05■□□□□ 0.48
MT-ND3P03897 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MT-ND3P03897 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MT-ND3P03897 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND3P03897 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.05■□□□□ 0.48
MT-ND3P03897 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.05■□□□□ 0.48
MT-ND3P03897 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MT-ND3P03897 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 AC100803.2-201ENST00000562459 1963 ntBASIC18.04■□□□□ 0.48
MT-ND3P03897 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MT-ND3P03897 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MT-ND3P03897 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.04■□□□□ 0.48
MT-ND3P03897 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND3P03897 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.04■□□□□ 0.48
MT-ND3P03897 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.04■□□□□ 0.48
MT-ND3P03897 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MT-ND3P03897 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.04■□□□□ 0.48
MT-ND3P03897 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms