Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.51■□□□□ 0.55
LMNAP02545 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LMNAP02545 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.51■□□□□ 0.55
LMNAP02545 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 AC073592.3-201ENST00000625118 1834 ntBASIC18.51■□□□□ 0.55
LMNAP02545 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LMNAP02545 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LMNAP02545 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 LINC00896-202ENST00000609602 2128 ntBASIC18.5■□□□□ 0.55
LMNAP02545 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LMNAP02545 GNAS-203ENST00000306120 1878 ntBASIC18.5■□□□□ 0.55
LMNAP02545 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LMNAP02545 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.5■□□□□ 0.55
LMNAP02545 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.5■□□□□ 0.55
LMNAP02545 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 AC145285.3-201ENST00000564603 959 ntBASIC18.5■□□□□ 0.55
LMNAP02545 MIR5100-201ENST00000579544 119 ntBASIC18.5■□□□□ 0.55
LMNAP02545 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.5■□□□□ 0.55
LMNAP02545 AL355877.3-201ENST00000622820 899 ntBASIC18.5■□□□□ 0.55
LMNAP02545 AC124067.4-201ENST00000519691 2379 ntBASIC18.5■□□□□ 0.55
LMNAP02545 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.5■□□□□ 0.55
LMNAP02545 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LMNAP02545 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LMNAP02545 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.49■□□□□ 0.55
LMNAP02545 AC104109.2-201ENST00000602919 1418 ntBASIC18.49■□□□□ 0.55
LMNAP02545 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.49■□□□□ 0.55
LMNAP02545 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.49■□□□□ 0.55
LMNAP02545 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.49■□□□□ 0.55
LMNAP02545 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.49■□□□□ 0.55
LMNAP02545 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.49■□□□□ 0.55
LMNAP02545 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.49■□□□□ 0.55
LMNAP02545 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
LMNAP02545 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.49■□□□□ 0.55
LMNAP02545 AC011840.4-201ENST00000578471 627 ntBASIC18.49■□□□□ 0.55
LMNAP02545 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 AC134684.3-201ENST00000641758 218 ntBASIC18.49■□□□□ 0.55
LMNAP02545 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.49■□□□□ 0.55
LMNAP02545 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 PKD1P1-201ENST00000458669 6805 ntBASIC18.49■□□□□ 0.55
LMNAP02545 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LMNAP02545 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LMNAP02545 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LMNAP02545 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.48■□□□□ 0.55
LMNAP02545 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.48■□□□□ 0.55
LMNAP02545 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.48■□□□□ 0.55
LMNAP02545 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LMNAP02545 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LMNAP02545 IGHGP-201ENST00000390555 1178 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms