Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC009102.3-201ENST00000623118 1491 ntBASIC14.04□□□□□ -0.16
IFNA1P01562 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
IFNA1P01562 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.04□□□□□ -0.16
IFNA1P01562 AC026691.1-201ENST00000602502 2017 ntBASIC14.03□□□□□ -0.16
IFNA1P01562 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.03□□□□□ -0.16
IFNA1P01562 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.03□□□□□ -0.16
IFNA1P01562 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.03□□□□□ -0.16
IFNA1P01562 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
IFNA1P01562 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.03□□□□□ -0.16
IFNA1P01562 AC016769.1-201ENST00000409132 1010 ntBASIC14.03□□□□□ -0.16
IFNA1P01562 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.03□□□□□ -0.16
IFNA1P01562 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 NTF6G-201ENST00000591094 616 ntBASIC14.03□□□□□ -0.16
IFNA1P01562 AC005837.3-201ENST00000612163 286 ntBASIC14.03□□□□□ -0.16
IFNA1P01562 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IFNA1P01562 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IFNA1P01562 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.03□□□□□ -0.16
IFNA1P01562 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IFNA1P01562 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
IFNA1P01562 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.02□□□□□ -0.16
IFNA1P01562 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IFNA1P01562 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.02□□□□□ -0.16
IFNA1P01562 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IFNA1P01562 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
IFNA1P01562 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
IFNA1P01562 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.02□□□□□ -0.16
IFNA1P01562 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
IFNA1P01562 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.02□□□□□ -0.17
IFNA1P01562 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 MIR149-201ENST00000384879 89 ntBASIC14.02□□□□□ -0.17
IFNA1P01562 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
IFNA1P01562 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.02□□□□□ -0.17
IFNA1P01562 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.02□□□□□ -0.17
IFNA1P01562 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IFNA1P01562 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
IFNA1P01562 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.02□□□□□ -0.17
IFNA1P01562 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.02□□□□□ -0.17
IFNA1P01562 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.02□□□□□ -0.17
IFNA1P01562 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.02□□□□□ -0.17
IFNA1P01562 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IFNA1P01562 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms