Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.31■□□□□ 0.84
MBD3O95983 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.31■□□□□ 0.84
MBD3O95983 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MBD3O95983 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MBD3O95983 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MBD3O95983 CRYGFP-201ENST00000418459 633 ntBASIC20.3■□□□□ 0.84
MBD3O95983 NUDT16P1-203ENST00000513809 620 ntBASIC20.3■□□□□ 0.84
MBD3O95983 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
MBD3O95983 AL023803.3-201ENST00000615559 522 ntBASIC20.3■□□□□ 0.84
MBD3O95983 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.3■□□□□ 0.84
MBD3O95983 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.3■□□□□ 0.84
MBD3O95983 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.3■□□□□ 0.84
MBD3O95983 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.3■□□□□ 0.84
MBD3O95983 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3O95983 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.3■□□□□ 0.84
MBD3O95983 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
MBD3O95983 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
MBD3O95983 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.29■□□□□ 0.84
MBD3O95983 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.29■□□□□ 0.84
MBD3O95983 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
MBD3O95983 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MBD3O95983 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 KRT18P29-201ENST00000397031 1267 ntBASIC20.29■□□□□ 0.84
MBD3O95983 AL355355.2-201ENST00000442321 338 ntBASIC20.29■□□□□ 0.84
MBD3O95983 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.29■□□□□ 0.84
MBD3O95983 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.29■□□□□ 0.84
MBD3O95983 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.29■□□□□ 0.84
MBD3O95983 AC006058.3-201ENST00000606217 1069 ntBASIC20.29■□□□□ 0.84
MBD3O95983 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.29■□□□□ 0.84
MBD3O95983 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.29■□□□□ 0.84
MBD3O95983 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.29■□□□□ 0.84
MBD3O95983 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.29■□□□□ 0.84
MBD3O95983 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MBD3O95983 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MBD3O95983 AL162727.3-201ENST00000635661 2787 ntBASIC20.29■□□□□ 0.84
MBD3O95983 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.28■□□□□ 0.84
MBD3O95983 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MBD3O95983 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MBD3O95983 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MBD3O95983 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.28■□□□□ 0.84
MBD3O95983 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
MBD3O95983 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
MBD3O95983 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms