Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.84□□□□□ -0.03
ABCA1O95477 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ABCA1O95477 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.83□□□□□ -0.03
ABCA1O95477 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.83□□□□□ -0.03
ABCA1O95477 AC092910.1-201ENST00000482027 1129 ntBASIC14.83□□□□□ -0.03
ABCA1O95477 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.83□□□□□ -0.03
ABCA1O95477 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.83□□□□□ -0.03
ABCA1O95477 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.83□□□□□ -0.03
ABCA1O95477 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.83□□□□□ -0.03
ABCA1O95477 AC025062.2-201ENST00000605477 670 ntBASIC14.83□□□□□ -0.03
ABCA1O95477 AC009154.2-201ENST00000621177 724 ntBASIC14.83□□□□□ -0.03
ABCA1O95477 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ABCA1O95477 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
ABCA1O95477 AC005332.8-201ENST00000622750 2735 ntBASIC14.83□□□□□ -0.04
ABCA1O95477 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 MTCL1P1-201ENST00000446207 792 ntBASIC14.83□□□□□ -0.04
ABCA1O95477 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.83□□□□□ -0.04
ABCA1O95477 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.83□□□□□ -0.04
ABCA1O95477 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ABCA1O95477 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
ABCA1O95477 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ABCA1O95477 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ABCA1O95477 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 SDHAP2-201ENST00000455183 2001 ntBASIC14.82□□□□□ -0.04
ABCA1O95477 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 MCCD1P2-201ENST00000423228 335 ntBASIC14.82□□□□□ -0.04
ABCA1O95477 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.82□□□□□ -0.04
ABCA1O95477 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
ABCA1O95477 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.82□□□□□ -0.04
ABCA1O95477 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 AC002310.6-201ENST00000624451 1377 ntBASIC14.82□□□□□ -0.04
ABCA1O95477 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ABCA1O95477 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.82□□□□□ -0.04
ABCA1O95477 MTDHP5-201ENST00000598980 586 ntBASIC14.82□□□□□ -0.04
ABCA1O95477 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ABCA1O95477 AC125634.1-201ENST00000438758 1403 ntBASIC14.82□□□□□ -0.04
ABCA1O95477 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ABCA1O95477 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ABCA1O95477 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ABCA1O95477 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 BX323043.1-201ENST00000641006 1765 ntBASIC14.81□□□□□ -0.04
ABCA1O95477 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ABCA1O95477 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCA1O95477 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ABCA1O95477 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ABCA1O95477 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCA1O95477 LAGE3P1-201ENST00000425356 484 ntBASIC14.81□□□□□ -0.04
ABCA1O95477 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCA1O95477 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.81□□□□□ -0.04
ABCA1O95477 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCA1O95477 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 BCL2-203ENST00000589955 5011 ntBASIC14.81□□□□□ -0.04
ABCA1O95477 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.81□□□□□ -0.04
ABCA1O95477 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCA1O95477 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.81□□□□□ -0.04
ABCA1O95477 HTR5BP-201ENST00000430851 1154 ntBASIC14.81□□□□□ -0.04
ABCA1O95477 METTL21AP1-201ENST00000438852 635 ntBASIC14.81□□□□□ -0.04
ABCA1O95477 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.81□□□□□ -0.04
ABCA1O95477 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms