Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GRIN3BO60391 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GRIN3BO60391 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
GRIN3BO60391 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
GRIN3BO60391 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.41■■□□□ 1.02
GRIN3BO60391 AC140658.5-201ENST00000438532 169 ntBASIC21.41■■□□□ 1.02
GRIN3BO60391 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.41■■□□□ 1.02
GRIN3BO60391 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GRIN3BO60391 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.41■■□□□ 1.02
GRIN3BO60391 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.41■■□□□ 1.02
GRIN3BO60391 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.41■■□□□ 1.02
GRIN3BO60391 ACTL9-202ENST00000612068 1252 ntBASIC21.41■■□□□ 1.02
GRIN3BO60391 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GRIN3BO60391 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GRIN3BO60391 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GRIN3BO60391 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GRIN3BO60391 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GRIN3BO60391 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
GRIN3BO60391 AC092580.3-201ENST00000430932 139 ntBASIC21.4■■□□□ 1.02
GRIN3BO60391 SPDYE14P-201ENST00000442619 822 ntBASIC21.4■■□□□ 1.02
GRIN3BO60391 IGHV3-62-201ENST00000520057 340 ntBASIC21.4■■□□□ 1.02
GRIN3BO60391 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.4■■□□□ 1.02
GRIN3BO60391 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.4■■□□□ 1.02
GRIN3BO60391 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.4■■□□□ 1.02
GRIN3BO60391 AL135744.1-201ENST00000565098 629 ntBASIC21.4■■□□□ 1.02
GRIN3BO60391 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.4■■□□□ 1.02
GRIN3BO60391 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.4■■□□□ 1.02
GRIN3BO60391 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.4■■□□□ 1.02
GRIN3BO60391 MIR6805-201ENST00000615055 62 ntBASIC21.4■■□□□ 1.02
GRIN3BO60391 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.4■■□□□ 1.02
GRIN3BO60391 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.4■■□□□ 1.02
GRIN3BO60391 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GRIN3BO60391 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.02
GRIN3BO60391 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.39■■□□□ 1.02
GRIN3BO60391 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.39■■□□□ 1.02
GRIN3BO60391 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
GRIN3BO60391 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GRIN3BO60391 MIR1909-201ENST00000411312 80 ntBASIC21.39■■□□□ 1.01
GRIN3BO60391 AC092658.1-201ENST00000505836 891 ntBASIC21.39■■□□□ 1.01
GRIN3BO60391 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.39■■□□□ 1.01
GRIN3BO60391 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.39■■□□□ 1.01
GRIN3BO60391 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.39■■□□□ 1.01
GRIN3BO60391 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.39■■□□□ 1.01
GRIN3BO60391 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
GRIN3BO60391 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
GRIN3BO60391 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GRIN3BO60391 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.38■■□□□ 1.01
GRIN3BO60391 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.38■■□□□ 1.01
GRIN3BO60391 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
GRIN3BO60391 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.38■■□□□ 1.01
GRIN3BO60391 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.38■■□□□ 1.01
GRIN3BO60391 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.38■■□□□ 1.01
GRIN3BO60391 LINC00982-205ENST00000420957 435 ntBASIC21.38■■□□□ 1.01
GRIN3BO60391 GIMAP3P-201ENST00000495150 836 ntBASIC21.38■■□□□ 1.01
GRIN3BO60391 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.38■■□□□ 1.01
GRIN3BO60391 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.38■■□□□ 1.01
GRIN3BO60391 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
GRIN3BO60391 KRT8P23-201ENST00000560090 1207 ntBASIC21.38■■□□□ 1.01
GRIN3BO60391 RARRES2P8-201ENST00000566335 367 ntBASIC21.38■■□□□ 1.01
GRIN3BO60391 TP53TG3HP-202ENST00000569755 579 ntBASIC21.38■■□□□ 1.01
GRIN3BO60391 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GRIN3BO60391 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.37■■□□□ 1.01
GRIN3BO60391 AC098614.1-201ENST00000368528 745 ntBASIC21.37■■□□□ 1.01
GRIN3BO60391 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.37■■□□□ 1.01
GRIN3BO60391 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.37■■□□□ 1.01
GRIN3BO60391 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.37■■□□□ 1.01
GRIN3BO60391 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 AL162274.1-201ENST00000617191 1098 ntBASIC21.37■■□□□ 1.01
GRIN3BO60391 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms