Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.94■□□□□ 0.46
KDELR3O43731 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 AL355877.3-201ENST00000622820 899 ntBASIC17.94■□□□□ 0.46
KDELR3O43731 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.94■□□□□ 0.46
KDELR3O43731 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
KDELR3O43731 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.94■□□□□ 0.46
KDELR3O43731 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
KDELR3O43731 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDELR3O43731 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KDELR3O43731 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 AL355312.1-201ENST00000407115 2176 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 MYCLP1-201ENST00000372451 1075 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 FAAHP1-202ENST00000446499 1238 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 MTDHP3-201ENST00000594186 672 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 AC008608.2-201ENST00000606089 416 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 AC073592.5-201ENST00000624854 528 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.93■□□□□ 0.46
KDELR3O43731 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.93■□□□□ 0.46
KDELR3O43731 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.93■□□□□ 0.46
KDELR3O43731 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 HLA-J-201ENST00000462773 1622 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDELR3O43731 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
KDELR3O43731 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KDELR3O43731 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
KDELR3O43731 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.93■□□□□ 0.46
KDELR3O43731 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.93■□□□□ 0.46
KDELR3O43731 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.92■□□□□ 0.46
KDELR3O43731 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.92■□□□□ 0.46
KDELR3O43731 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.92■□□□□ 0.46
KDELR3O43731 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.92■□□□□ 0.46
KDELR3O43731 AC132938.5-201ENST00000624980 1813 ntBASIC17.92■□□□□ 0.46
KDELR3O43731 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.92■□□□□ 0.46
KDELR3O43731 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.92■□□□□ 0.46
KDELR3O43731 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 AC133963.1-201ENST00000504166 1679 ntBASIC17.92■□□□□ 0.46
KDELR3O43731 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KDELR3O43731 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
KDELR3O43731 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KDELR3O43731 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.91■□□□□ 0.46
KDELR3O43731 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.91■□□□□ 0.46
KDELR3O43731 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KDELR3O43731 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KDELR3O43731 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.91■□□□□ 0.46
KDELR3O43731 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
KDELR3O43731 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.91■□□□□ 0.46
KDELR3O43731 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KDELR3O43731 FGFR3P6-201ENST00000457012 610 ntBASIC17.91■□□□□ 0.46
KDELR3O43731 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.91■□□□□ 0.46
KDELR3O43731 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.91■□□□□ 0.46
KDELR3O43731 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.91■□□□□ 0.46
KDELR3O43731 STK25P1-201ENST00000585406 838 ntBASIC17.91■□□□□ 0.46
KDELR3O43731 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.91■□□□□ 0.46
KDELR3O43731 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KDELR3O43731 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.91■□□□□ 0.46
KDELR3O43731 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms