Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.71■□□□□ 0.11
SGCEO43556 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.71■□□□□ 0.11
SGCEO43556 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.71■□□□□ 0.11
SGCEO43556 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SGCEO43556 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SGCEO43556 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SGCEO43556 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SGCEO43556 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 AC012317.2-201ENST00000623305 2251 ntBASIC15.7■□□□□ 0.1
SGCEO43556 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 AC100803.2-201ENST00000562459 1963 ntBASIC15.7■□□□□ 0.1
SGCEO43556 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.7■□□□□ 0.1
SGCEO43556 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.7■□□□□ 0.1
SGCEO43556 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SGCEO43556 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.7■□□□□ 0.1
SGCEO43556 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.7■□□□□ 0.1
SGCEO43556 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.7■□□□□ 0.1
SGCEO43556 AC083849.1-201ENST00000615227 514 ntBASIC15.7■□□□□ 0.1
SGCEO43556 AC009154.2-201ENST00000621177 724 ntBASIC15.7■□□□□ 0.1
SGCEO43556 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SGCEO43556 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.7■□□□□ 0.1
SGCEO43556 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SGCEO43556 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SGCEO43556 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SGCEO43556 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SGCEO43556 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 MST1L-201ENST00000442552 2185 ntBASIC15.69■□□□□ 0.1
SGCEO43556 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.69■□□□□ 0.1
SGCEO43556 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SGCEO43556 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.69■□□□□ 0.1
SGCEO43556 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.69■□□□□ 0.1
SGCEO43556 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
SGCEO43556 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SGCEO43556 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.69■□□□□ 0.1
SGCEO43556 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.69■□□□□ 0.1
SGCEO43556 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.69■□□□□ 0.1
SGCEO43556 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms