Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN3O15551 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN3O15551 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN3O15551 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.35■□□□□ 0.69
CLDN3O15551 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 AC132008.2-207ENST00000454517 770 ntBASIC19.35■□□□□ 0.69
CLDN3O15551 AC122714.2-201ENST00000502787 707 ntBASIC19.35■□□□□ 0.69
CLDN3O15551 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN3O15551 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 AC008764.6-201ENST00000595909 2069 ntBASIC19.35■□□□□ 0.69
CLDN3O15551 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLDN3O15551 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 BX276092.7-203ENST00000637198 1536 ntBASIC19.35■□□□□ 0.69
CLDN3O15551 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.35■□□□□ 0.69
CLDN3O15551 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLDN3O15551 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLDN3O15551 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN3O15551 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLDN3O15551 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN3O15551 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN3O15551 SLC25A6P5-201ENST00000435663 894 ntBASIC19.34■□□□□ 0.69
CLDN3O15551 TPM4P1-201ENST00000436100 807 ntBASIC19.34■□□□□ 0.69
CLDN3O15551 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.34■□□□□ 0.69
CLDN3O15551 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.34■□□□□ 0.69
CLDN3O15551 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.34■□□□□ 0.69
CLDN3O15551 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLDN3O15551 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.34■□□□□ 0.69
CLDN3O15551 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN3O15551 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN3O15551 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CLDN3O15551 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 AC090340.1-201ENST00000620778 4980 ntBASIC19.33■□□□□ 0.69
CLDN3O15551 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN3O15551 AC004870.1-201ENST00000315132 882 ntBASIC19.33■□□□□ 0.68
CLDN3O15551 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDN3O15551 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDN3O15551 EMBP1-201ENST00000458200 901 ntBASIC19.33■□□□□ 0.68
CLDN3O15551 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.33■□□□□ 0.68
CLDN3O15551 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN3O15551 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDN3O15551 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CLDN3O15551 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN3O15551 REXO1L6P-202ENST00000619970 1078 ntBASIC19.33■□□□□ 0.68
CLDN3O15551 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN3O15551 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN3O15551 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLDN3O15551 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN3O15551 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CLDN3O15551 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN3O15551 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms