Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.95■□□□□ 0.3
CDX4O14627 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CDX4O14627 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDX4O14627 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDX4O14627 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CDX4O14627 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.94■□□□□ 0.3
CDX4O14627 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.94■□□□□ 0.3
CDX4O14627 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 AL513480.1-201ENST00000451731 511 ntBASIC16.94■□□□□ 0.3
CDX4O14627 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.94■□□□□ 0.3
CDX4O14627 KRT8P48-201ENST00000515599 1220 ntBASIC16.94■□□□□ 0.3
CDX4O14627 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.94■□□□□ 0.3
CDX4O14627 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDX4O14627 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.94■□□□□ 0.3
CDX4O14627 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDX4O14627 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CDX4O14627 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDX4O14627 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.93■□□□□ 0.3
CDX4O14627 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 AC002056.1-201ENST00000395613 760 ntBASIC16.93■□□□□ 0.3
CDX4O14627 TFAMP1-201ENST00000412727 736 ntBASIC16.93■□□□□ 0.3
CDX4O14627 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.93■□□□□ 0.3
CDX4O14627 AC005237.2-201ENST00000434368 219 ntBASIC16.93■□□□□ 0.3
CDX4O14627 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.93■□□□□ 0.3
CDX4O14627 CNN2P2-201ENST00000443536 909 ntBASIC16.93■□□□□ 0.3
CDX4O14627 CNN2P3-201ENST00000450201 906 ntBASIC16.93■□□□□ 0.3
CDX4O14627 GAPDHP21-201ENST00000450301 1010 ntBASIC16.93■□□□□ 0.3
CDX4O14627 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.93■□□□□ 0.3
CDX4O14627 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.93■□□□□ 0.3
CDX4O14627 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX4O14627 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX4O14627 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.93■□□□□ 0.3
CDX4O14627 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.93■□□□□ 0.3
CDX4O14627 ACTL9-202ENST00000612068 1252 ntBASIC16.93■□□□□ 0.3
CDX4O14627 AL136317.3-201ENST00000618497 906 ntBASIC16.93■□□□□ 0.3
CDX4O14627 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.93■□□□□ 0.3
CDX4O14627 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.93■□□□□ 0.3
CDX4O14627 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDX4O14627 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDX4O14627 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.92■□□□□ 0.3
CDX4O14627 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 AL355306.1-201ENST00000415580 579 ntBASIC16.92■□□□□ 0.3
CDX4O14627 AL671277.1-201ENST00000429656 993 ntBASIC16.92■□□□□ 0.3
CDX4O14627 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.92■□□□□ 0.3
CDX4O14627 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.92■□□□□ 0.3
CDX4O14627 UGT1A2P-201ENST00000454886 866 ntBASIC16.92■□□□□ 0.3
CDX4O14627 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDX4O14627 AC069335.1-201ENST00000489972 472 ntBASIC16.92■□□□□ 0.3
CDX4O14627 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.92■□□□□ 0.3
CDX4O14627 AL512356.2-201ENST00000546955 174 ntBASIC16.92■□□□□ 0.3
CDX4O14627 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.92■□□□□ 0.3
CDX4O14627 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDX4O14627 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms