Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TAF4O00268 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 RCN1P2-201ENST00000398357 915 ntBASIC17.36■□□□□ 0.37
TAF4O00268 RPS2P1-201ENST00000434010 821 ntBASIC17.36■□□□□ 0.37
TAF4O00268 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.36■□□□□ 0.37
TAF4O00268 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.36■□□□□ 0.37
TAF4O00268 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.36■□□□□ 0.37
TAF4O00268 AC021087.4-201ENST00000563761 564 ntBASIC17.36■□□□□ 0.37
TAF4O00268 AC024563.2-201ENST00000603282 481 ntBASIC17.36■□□□□ 0.37
TAF4O00268 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.36■□□□□ 0.37
TAF4O00268 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.36■□□□□ 0.37
TAF4O00268 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.36■□□□□ 0.37
TAF4O00268 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TAF4O00268 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.36■□□□□ 0.37
TAF4O00268 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 KRT8P7-201ENST00000533003 1432 ntBASIC17.36■□□□□ 0.37
TAF4O00268 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.36■□□□□ 0.37
TAF4O00268 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TAF4O00268 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
TAF4O00268 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TAF4O00268 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.35■□□□□ 0.37
TAF4O00268 AC139713.2-201ENST00000641328 2723 ntBASIC17.35■□□□□ 0.37
TAF4O00268 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.35■□□□□ 0.37
TAF4O00268 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TAF4O00268 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TAF4O00268 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 RBM17P3-201ENST00000417687 1192 ntBASIC17.35■□□□□ 0.37
TAF4O00268 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
TAF4O00268 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.35■□□□□ 0.37
TAF4O00268 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.35■□□□□ 0.37
TAF4O00268 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TAF4O00268 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
TAF4O00268 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.35■□□□□ 0.37
TAF4O00268 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.35■□□□□ 0.37
TAF4O00268 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TAF4O00268 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TAF4O00268 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.34■□□□□ 0.37
TAF4O00268 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TAF4O00268 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.34■□□□□ 0.37
TAF4O00268 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.34■□□□□ 0.37
TAF4O00268 AC023274.1-201ENST00000418278 595 ntBASIC17.34■□□□□ 0.37
TAF4O00268 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TAF4O00268 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.34■□□□□ 0.37
TAF4O00268 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.34■□□□□ 0.37
TAF4O00268 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.34■□□□□ 0.37
TAF4O00268 AL031598.1-201ENST00000561511 1773 ntBASIC17.34■□□□□ 0.37
TAF4O00268 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
TAF4O00268 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.34■□□□□ 0.37
TAF4O00268 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.34■□□□□ 0.37
TAF4O00268 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TAF4O00268 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TAF4O00268 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TAF4O00268 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TAF4O00268 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TAF4O00268 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TAF4O00268 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.33■□□□□ 0.37
TAF4O00268 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TAF4O00268 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TAF4O00268 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms