Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM1O00151 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM1O00151 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.91■□□□□ 0.3
PDLIM1O00151 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM1O00151 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM1O00151 FITM1-202ENST00000559294 800 ntBASIC16.91■□□□□ 0.3
PDLIM1O00151 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM1O00151 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 AP000525.1-201ENST00000608286 694 ntBASIC16.91■□□□□ 0.3
PDLIM1O00151 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM1O00151 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PDLIM1O00151 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM1O00151 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PDLIM1O00151 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM1O00151 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM1O00151 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM1O00151 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM1O00151 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.9■□□□□ 0.3
PDLIM1O00151 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM1O00151 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM1O00151 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PDLIM1O00151 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 AP005242.2-201ENST00000580065 1175 ntBASIC16.9■□□□□ 0.3
PDLIM1O00151 AC073912.3-201ENST00000624414 853 ntBASIC16.9■□□□□ 0.3
PDLIM1O00151 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM1O00151 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM1O00151 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 AL109659.2-201ENST00000606809 1674 ntBASIC16.9■□□□□ 0.3
PDLIM1O00151 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PDLIM1O00151 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM1O00151 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM1O00151 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM1O00151 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 AC106886.4-201ENST00000623557 2502 ntBASIC16.9■□□□□ 0.3
PDLIM1O00151 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM1O00151 AC096733.2-201ENST00000609937 1394 ntBASIC16.89■□□□□ 0.3
PDLIM1O00151 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.89■□□□□ 0.3
PDLIM1O00151 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PDLIM1O00151 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PDLIM1O00151 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PDLIM1O00151 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 AL662844.4-201ENST00000606367 2838 ntBASIC16.89■□□□□ 0.29
PDLIM1O00151 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM1O00151 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PDLIM1O00151 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.89■□□□□ 0.29
PDLIM1O00151 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 AP000593.1-201ENST00000393668 712 ntBASIC16.89■□□□□ 0.29
PDLIM1O00151 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 FAM207BP-201ENST00000447172 505 ntBASIC16.89■□□□□ 0.29
PDLIM1O00151 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM1O00151 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM1O00151 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM1O00151 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM1O00151 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM1O00151 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms