Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 STK33P1-201ENST00000423835 1218 ntBASIC17.68■□□□□ 0.42
CFAP99D6REC4 DRAXINP1-201ENST00000437611 948 ntBASIC17.68■□□□□ 0.42
CFAP99D6REC4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 Z69720.1-201ENST00000601483 472 ntBASIC17.68■□□□□ 0.42
CFAP99D6REC4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CFAP99D6REC4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CFAP99D6REC4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.67■□□□□ 0.42
CFAP99D6REC4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CFAP99D6REC4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP99D6REC4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP99D6REC4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP99D6REC4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms