Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 AC067930.6-201ENST00000623257 4947 ntBASIC12.62□□□□□ -0.39
LINC01549A6NIU2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 AC105020.1-201ENST00000435356 2205 ntBASIC12.62□□□□□ -0.39
LINC01549A6NIU2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 HOXB1-202ENST00000577092 1414 ntBASIC12.62□□□□□ -0.39
LINC01549A6NIU2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01549A6NIU2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.61□□□□□ -0.39
LINC01549A6NIU2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 KRT18P5-201ENST00000436075 1291 ntBASIC12.61□□□□□ -0.39
LINC01549A6NIU2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 MIR4758-201ENST00000577688 71 ntBASIC12.61□□□□□ -0.39
LINC01549A6NIU2 MIR3180-4-201ENST00000582223 153 ntBASIC12.61□□□□□ -0.39
LINC01549A6NIU2 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.61□□□□□ -0.39
LINC01549A6NIU2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01549A6NIU2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms