Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HFM1A2PYH4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 AC092910.1-201ENST00000482027 1129 ntBASIC26.04■■□□□ 1.76
HFM1A2PYH4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 AC136632.2-201ENST00000512891 861 ntBASIC26.04■■□□□ 1.76
HFM1A2PYH4 AC034105.1-201ENST00000563488 319 ntBASIC26.04■■□□□ 1.76
HFM1A2PYH4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC26.04■■□□□ 1.76
HFM1A2PYH4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 AC006504.4-201ENST00000592118 1568 ntBASIC26.03■■□□□ 1.76
HFM1A2PYH4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 AL805961.1-202ENST00000641562 540 ntBASIC26.03■■□□□ 1.76
HFM1A2PYH4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
HFM1A2PYH4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
HFM1A2PYH4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 AL135999.2-201ENST00000622438 1686 ntBASIC26.02■■□□□ 1.76
HFM1A2PYH4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC26.02■■□□□ 1.76
HFM1A2PYH4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC26.02■■□□□ 1.76
HFM1A2PYH4 PMS2P1-201ENST00000431037 1228 ntBASIC26.02■■□□□ 1.76
HFM1A2PYH4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26.02■■□□□ 1.76
HFM1A2PYH4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC26.02■■□□□ 1.76
HFM1A2PYH4 AC106730.1-201ENST00000566722 1090 ntBASIC26.02■■□□□ 1.76
HFM1A2PYH4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC26.02■■□□□ 1.76
HFM1A2PYH4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HFM1A2PYH4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 GPR89P-201ENST00000407924 1495 ntBASIC26.01■■□□□ 1.75
HFM1A2PYH4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HFM1A2PYH4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC26.01■■□□□ 1.75
HFM1A2PYH4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC26■■□□□ 1.75
HFM1A2PYH4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC26■■□□□ 1.75
HFM1A2PYH4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HFM1A2PYH4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HFM1A2PYH4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC26■■□□□ 1.75
HFM1A2PYH4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
HFM1A2PYH4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC26■■□□□ 1.75
HFM1A2PYH4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC26■■□□□ 1.75
HFM1A2PYH4 SLC25A1P3-201ENST00000395415 828 ntBASIC26■■□□□ 1.75
HFM1A2PYH4 Z83851.2-201ENST00000609564 659 ntBASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms