Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 AC005104.2-201ENST00000427818 678 ntBASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 AC112698.1-201ENST00000510299 916 ntBASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 AL023973.1-201ENST00000624619 620 ntBASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 AC106886.4-201ENST00000623557 2502 ntBASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV9S1A1TA0A576 AC016396.2-201ENST00000562575 1417 ntBASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 KRT18P22-201ENST00000402024 1347 ntBASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV9S1A1TA0A576 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 AC060834.1-201ENST00000443027 2032 ntBASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 TNRC18P3-201ENST00000441896 2691 ntBASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV9S1A1TA0A576 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 TSPY12P-201ENST00000421279 868 ntBASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV9S1A1TA0A576 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms