Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 LINC00982-205ENST00000420957 435 ntBASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 AC023141.5-201ENST00000458585 616 ntBASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC163A0A0D9SF12 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 AC092474.2-201ENST00000424288 719 ntBASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 AC022145.2-201ENST00000598203 171 ntBASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC163A0A0D9SF12 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 MYCLP1-201ENST00000372451 1075 ntBASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 AC067863.1-201ENST00000494933 530 ntBASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC163A0A0D9SF12 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 ACTG1P4-201ENST00000425123 1122 ntBASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 AC002558.1-201ENST00000488906 803 ntBASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 RNA5SP421-201ENST00000516864 134 ntBASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 AC112191.1-201ENST00000523689 701 ntBASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC163A0A0D9SF12 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms