Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 AC116407.4-201ENST00000623319 1061 ntBASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 PP12613-201ENST00000424958 2230 ntBASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB3Q9Y5G1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 AC112907.2-201ENST00000448639 330 ntBASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 RASA4DP-201ENST00000460726 1199 ntBASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 DUTP2-201ENST00000519164 463 ntBASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 KRT89P-201ENST00000620027 1478 ntBASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB3Q9Y5G1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 AC080080.1-201ENST00000625121 2420 ntBASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 KRT18P38-201ENST00000449496 1282 ntBASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 AC113404.2-201ENST00000507884 177 ntBASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 ZNF444P1-201ENST00000559497 298 ntBASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 IER3-202ENST00000376377 1350 ntBASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB3Q9Y5G1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGB3Q9Y5G1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PCDHGB3Q9Y5G1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGB3Q9Y5G1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGB3Q9Y5G1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGB3Q9Y5G1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms